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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs113502458 chr1:233153124 T/C 2.86E-5 490 37.4 37.42 14.92 KM Plot
KIRC rs113577760 chr19:46365177 T/C 9.31E-8 503 38.47 29.13 1.77 KM Plot
KIRC rs113666002 chr19:46350418 C/T 9.84E-8 505 38.1 28.65 1.77 KM Plot
KIRC rs113702725 chr2:67533129 T/C 1.88E-7 505 37.18 37.73 2.03 KM Plot
KIRC rs11371903 chr4:123284623 T/TC 1.02E-5 505 36.97 48.63 4.22 KM Plot
KIRC rs113764857 chr15:24431490 C/T 1.93E-8 503 37.5 32.7 3.3 KM Plot
KIRC rs11379529 chr4:186355846 A/AC 7.4E-7 500 3.53 38 36.9 KM Plot
KIRC rs11379530 chr4:186355842 C/CT 7.4E-7 500 3.53 38 36.9 KM Plot
KIRC rs11384447 chr2:89033706 A/AT 2.88E-6 505 37.47 33.93 3.67 KM Plot
KIRC rs113918702 chr20:45094572 G/A 4.19E-5 505 38.1 32.52 4.75 KM Plot
KIRC rs114042452 chr1:62649840 C/T 3.11E-5 504 37.03 42.33 8.17 KM Plot
KIRC rs11406235 chr19:43812126 C/CT 4.17E-12 507 37.6 36.93 2.17 KM Plot
KIRC rs114194735 chr2:67563552 C/G 2.64E-7 505 37.18 37.67 2.03 KM Plot
KIRC rs114223960 chr4:107879506 G/A 1.28E-5 508 37.67 35.83 9.02 KM Plot
KIRC rs114540512 chr4:169161338 G/A 2.16E-8 508 37.18 39.23 3.1 KM Plot